Staff Scientist Genomics - Spatial Transcriptomics (f/m/x)

Staff Scientist Genomics - Spatial Transcriptomics (f/m/x)

102936

Full time
39 hrs./week

Neuherberg near Munich

At Helmholtz Munich, we develop groundbreaking solutions for a healthier society in a rapidly changing world. We believe that diverse perspectives drive innovation. Through strong partnerships, we accelerate the transfer of new ideas from the lab to real-life applications, improving lives.

Core Facility Genomics provides a wide range of cutting-edge genomics and spatial biology services to a diverse research community across academia and industry. Working together with colleagues from other in-house cores we support projects ranging from basic biology to translational research, leveraging state-of-the-art technologies including 10x Genomics Visium and Xenium platforms.

We are looking for a highly motivated scientist (f/m/x) with expert skills in spatial transcriptomics and NGS applications to join the team of the Genomics Core facility. You will play a central role supporting users with ongoing and upcoming spatial transcriptomics projects, as well as implement, optimize and further expand new application in this area. We are offering a unique multi-disciplinary position bringing together genomics, histology, and imaging data analysis. If you are thrilled by novel scientific challenges and would like to work in a highly collaborative, interdisciplinary and cutting-edge team outside a traditional academic role, this could be a great opportunity for you.

Your tasks

• Support core customers in experimental design and troubleshooting
• Perform quality control of submitted samples (RNA, DNA, libraries, single cells)
• Perform customer experiments in Spatial Transcriptomics applications (Xenium and Visium) and NGS applications (Library prep and sequencing)
• Set-up and operate complex equipment (e.g., Xenium, pipetting robots, various Illumina sequencers)
• Establish and standardize methods for existing and upcoming spatial transcriptomics technologies
• Establish, maintain, expand cross-disciplinary workflows and collaboration across various core facilities (especially CF-PTA and CF-BIOS) to maintain a comprehensive workflow for spatial transcriptomics
• In collaboration with colleagues contribute to training users for spatial transcriptomics
• Support customers with SOPs, reports, publications and presentations
• Support maintenance of the LIMS systems and electronic data bases
• Support smooth operation of the core facility (ordering, storing, instrument QC etc.)

Your profile

• PhD-degree in biology or in a related field or MSc/senior technician with at least 10 years hands-on NGS experience; Postdoc with a relevant project (spatial transcriptomics) is a bonus
• Experience with Spatial Transcriptomics workflows (especially Xenium and Visium) is a must
• Advanced knowledge and hands-on skills in molecular biology and NGS applications (library prep, sequencing, basic data analysis)
• Proven skills in method development and workflow optimization
• Experience in writing scientific reports and SOPs
• Experience in cell culture, tissue preparation techniques and microscopy is a plus
• Good management, communication and organization skills
• Clear customer service mentality to support users of the core facility
• Able to work independently and as part of a larger team, attention to detail and rigor
• Proficient English language skills (both written and spoken), German language skills at least B2 level

If you fulfill all the requirements, you may be eligible for a salary grade of up to E 13. Social benefits are based on the Collective Wage Agreement for Public-Sector Employees (TVöD). This position is for a fixed term of 18 months (maternity leave cover).

Managing Director Mike Frieser:

„We believe that diversity is the key to groundbreaking research and innovative solutions. Our flexible working models and remote options create a supportive environment for balancing work and family life. For us, contributing to a healthier society in such an inspiring workplace is truly meaningful.“

Get to know us

Benefits

• Career Development Postdoc program, scientific training & career center with tailored offers
• Family Support On-site kindergarten, holiday care, care for the elderly
• Health Promotion Sports, company doctor, mental health initiatives
• International Staff Service Support with the relocation and integration process in Germany
• Scientific Resources State-of-the-art infrastructure and Core Facilities
• Work-Life-Balance Flexible working hours and flexi-time models

Interested in applying?

If you have any questions, feel free to contact Inti Alberto De la Rosa Velazquez, inti.delarosavelazquez@helmholtz-munich.de, who will be happy to help.